Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4965 domain-containing protein | EZ437_11330 | Not Available | Positive | 2599841 - 2602318 | 91226.7 |
| rna-binding protein | EZ437_11335 | Not Available | Positive | 2602390 - 2605725 | 123424.0 |
| phospholipase | EZ437_11340 | Not Available | Negative | 2605726 - 2606349 | 22250.8 |
| ring-cleaving dioxygenase | EZ437_11345 | Not Available | Negative | 2606351 - 2607286 | 35332.6 |
| fatty acid hydroxylase | EZ437_11350 | Not Available | Positive | 2607461 - 2608063 | 23554.7 |
| pas domain s-box protein | EZ437_11355 | Not Available | Negative | 2608275 - 2610578 | 87353.0 |
| hypothetical protein | EZ437_11360 | Not Available | Positive | 2610970 - 2611977 | 38696.2 |
| glycoside hydrolase | EZ437_11365 | Not Available | Positive | 2612136 - 2613155 | 39308.1 |
| carbohydrate-binding protein | EZ437_11370 | Not Available | Positive | 2613158 - 2616586 | 127114.0 |
| sodium:solute symporter | EZ437_11375 | Not Available | Positive | 2616712 - 2618538 | 68476.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

