Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EZ437_11280 | Not Available | Positive | 2584089 - 2585633 | 58554.6 |
| atp/gtp-binding protein | EZ437_11285 | Not Available | Positive | 2585649 - 2586842 | 44337.8 |
| duf5007 domain-containing protein | EZ437_11290 | Not Available | Positive | 2586869 - 2587963 | 41199.1 |
| susc/raga family tonb-linked outer membrane protein | EZ437_11295 | Not Available | Positive | 2587989 - 2591186 | 117447.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_11300 | Not Available | Positive | 2591210 - 2592835 | 61385.5 |
| hypothetical protein | EZ437_11305 | Not Available | Positive | 2592856 - 2593620 | 28539.4 |
| duf5008 domain-containing protein | EZ437_11310 | Not Available | Positive | 2593640 - 2595232 | 57622.9 |
| duf4983 domain-containing protein | EZ437_11315 | Not Available | Positive | 2595236 - 2597080 | 67678.6 |
| carbohydrate-binding protein | EZ437_11320 | Not Available | Positive | 2597151 - 2598608 | 52089.1 |
| duf5013 domain-containing protein | EZ437_11325 | Not Available | Positive | 2598663 - 2599766 | 40549.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

