Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1097 domain-containing protein | EZ437_11080 | Not Available | Negative | 2530247 - 2530738 | 17820.5 |
| sdr family oxidoreductase | EZ437_11085 | Not Available | Negative | 2530790 - 2531530 | 26220.4 |
| pas domain s-box protein | EZ437_11090 | Not Available | Positive | 2532248 - 2535364 | 116833.0 |
| response regulator | EZ437_11095 | Not Available | Positive | 2535351 - 2535743 | 15012.5 |
| hypothetical protein | EZ437_11100 | Not Available | Positive | 2535946 - 2536131 | 7158.64 |
| sigma-70 family rna polymerase sigma factor | EZ437_11105 | Not Available | Positive | 2536226 - 2536825 | 23146.3 |
| fecr family protein | EZ437_11110 | Not Available | Positive | 2536912 - 2538060 | 42550.2 |
| susc/raga family tonb-linked outer membrane protein | EZ437_11115 | Not Available | Positive | 2538204 - 2541563 | 122044.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_11120 | Not Available | Positive | 2541583 - 2543031 | 53574.7 |
| abc transporter atp-binding protein | EZ437_11125 | Not Available | Positive | 2543193 - 2544125 | 34874.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

