Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ437_10605 | Not Available | Negative | 2422524 - 2425310 | 104506.0 |
| hypothetical protein | EZ437_10610 | Not Available | Negative | 2425463 - 2425939 | 18506.0 |
| tfox family protein | EZ437_10615 | Not Available | Positive | 2426251 - 2426619 | 13863.9 |
| zeta toxin | EZ437_10620 | Not Available | Positive | 2426696 - 2427286 | 22107.8 |
| hypothetical protein | EZ437_10625 | Not Available | Positive | 2427283 - 2427462 | 6354.75 |
| chad domain-containing protein | EZ437_10630 | Not Available | Positive | 2427842 - 2428600 | 29205.1 |
| cyth domain-containing protein | EZ437_10635 | Not Available | Positive | 2428604 - 2429071 | 17922.2 |
| llm class flavin-dependent oxidoreductase | EZ437_10645 | Not Available | Positive | 2430366 - 2431388 | 37828.7 |
| gliding motility-associated c-terminal domain-containing protein | EZ437_10650 | Not Available | Negative | 2431514 - 2434336 | 101031.0 |
| carboxypeptidase-like regulatory domain-containing protein | EZ437_10655 | Not Available | Positive | 2434495 - 2435712 | 46888.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

