Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EZ437_10205 | Not Available | Positive | 2329386 - 2332439 | 113730.0 |
| metallophosphoesterase family protein | EZ437_10210 | Not Available | Positive | 2332452 - 2333738 | 48980.1 |
| putative sulfate exporter family transporter | EZ437_10215 | Not Available | Positive | 2333973 - 2335229 | 45176.8 |
| sugar phosphate isomerase/epimerase | EZ437_10220 | Not Available | Negative | 2335251 - 2336123 | 32123.7 |
| hypothetical protein | EZ437_10225 | Not Available | Positive | 2336202 - 2336657 | 16808.2 |
| cupin domain-containing protein | EZ437_10230 | Not Available | Positive | 2336668 - 2337015 | 12721.2 |
| damage-inducible protein dinb | EZ437_10235 | Not Available | Positive | 2337100 - 2337597 | 19280.8 |
| yafy family transcriptional regulator | EZ437_10240 | Not Available | Negative | 2337579 - 2338592 | 39079.0 |
| hypothetical protein | EZ437_10245 | Not Available | Positive | 2338677 - 2340803 | 78374.1 |
| osmc family peroxiredoxin | EZ437_10250 | Not Available | Positive | 2340852 - 2341328 | 17812.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

