Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | EZ437_09905 | Not Available | Negative | 2265103 - 2265780 | 24854.7 |
| thioredoxin | EZ437_09910 | Not Available | Negative | 2265783 - 2266298 | 19577.1 |
| duf2892 domain-containing protein | EZ437_09915 | Not Available | Positive | 2266396 - 2266935 | 20649.8 |
| hypothetical protein | EZ437_09920 | Not Available | Negative | 2266944 - 2267156 | 8429.84 |
| lysine--trna ligase | EZ437_09925 | Not Available | Negative | 2267244 - 2268965 | 65533.8 |
| long-chain fatty acid--coa ligase | EZ437_09930 | Not Available | Negative | 2269030 - 2270943 | 71842.1 |
| iron-sulfur cluster assembly accessory protein | EZ437_09935 | Not Available | Negative | 2271012 - 2271338 | 11993.0 |
| fe-s cluster assembly scaffold iscu | EZ437_09940 | Not Available | Negative | 2271392 - 2271805 | 14836.7 |
| iscs subfamily cysteine desulfurase | EZ437_09945 | Not Available | Negative | 2271918 - 2273129 | 44248.1 |
| methylmalonyl-coa epimerase | EZ437_09950 | Not Available | Positive | 2273254 - 2273655 | 14916.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

