Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | EZ437_09855 | Not Available | Positive | 2253975 - 2254658 | 24606.7 |
| hypothetical protein | EZ437_09860 | Not Available | Negative | 2254680 - 2256095 | 53680.3 |
| hypothetical protein | EZ437_09865 | Not Available | Negative | 2256140 - 2257735 | 60705.8 |
| duf423 domain-containing protein | EZ437_09870 | Not Available | Positive | 2257830 - 2258225 | 14254.8 |
| primosomal protein n' | EZ437_09875 | Not Available | Positive | 2258218 - 2260698 | 93565.3 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | EZ437_09880 | Not Available | Positive | 2260796 - 2261452 | 24682.8 |
| ssra-binding protein smpb | EZ437_09885 | Not Available | Negative | 2261465 - 2261914 | 17499.4 |
| iron/manganese transporter | EZ437_09890 | Not Available | Negative | 2261938 - 2263812 | 68636.2 |
| metal-dependent transcriptional regulator | EZ437_09895 | Not Available | Negative | 2263846 - 2264499 | 24752.2 |
| lrp/asnc family transcriptional regulator | EZ437_09900 | Not Available | Positive | 2264636 - 2265106 | 17984.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

