Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system membrane protein porp/sprf | EZ437_09805 | Not Available | Positive | 2245423 - 2246439 | 37402.8 |
| rna polymerase sigma-54 factor | EZ437_09810 | Not Available | Negative | 2246470 - 2247942 | 56700.3 |
| gfo/idh/moca family oxidoreductase | EZ437_09815 | Not Available | Negative | 2248019 - 2249410 | 51509.2 |
| large conductance mechanosensitive channel protein mscl | EZ437_09820 | Not Available | Positive | 2249763 - 2250194 | 15272.0 |
| hypothetical protein | EZ437_09825 | Not Available | Positive | 2250442 - 2251215 | 28558.7 |
| sensor histidine kinase | EZ437_09830 | Not Available | Positive | 2251360 - 2252307 | 35923.1 |
| response regulator | EZ437_09835 | Not Available | Positive | 2252285 - 2253025 | 27920.9 |
| 50s ribosomal protein l34 | EZ437_09840 | Not Available | Positive | 2253116 - 2253274 | 6148.54 |
| ribonuclease p protein component | EZ437_09845 | Not Available | Positive | 2253342 - 2253746 | 15911.4 |
| membrane protein insertion efficiency factor yidd | EZ437_09850 | Not Available | Positive | 2253733 - 2253963 | 8483.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

