Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| act domain-containing protein | EZ437_09650 | Not Available | Positive | 2205796 - 2206629 | 31554.1 |
| 3-deoxy-7-phosphoheptulonate synthase | EZ437_09655 | Not Available | Positive | 2206679 - 2207818 | 41799.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | EZ437_09660 | Not Available | Positive | 2207821 - 2209074 | 45736.0 |
| chorismate synthase | EZ437_09665 | Not Available | Positive | 2209092 - 2210189 | 39129.7 |
| transketolase | EZ437_09670 | Not Available | Negative | 2210217 - 2212640 | 89918.0 |
| duf1573 domain-containing protein | EZ437_09675 | Not Available | Positive | 2212772 - 2213182 | 14538.8 |
| pyridoxal phosphate-dependent aminotransferase | EZ437_09680 | Not Available | Positive | 2213262 - 2214464 | 44312.4 |
| gfo/idh/moca family oxidoreductase | EZ437_09690 | Not Available | Positive | 2215005 - 2216123 | 40981.9 |
| gluconokinase | EZ437_09695 | Not Available | Positive | 2216131 - 2217612 | 54465.4 |
| hypothetical protein | EZ437_09700 | Not Available | Positive | 2217629 - 2218138 | 19366.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

