Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin synthase | EZ437_08750 | Not Available | Positive | 2002639 - 2003235 | 21919.1 |
| tetratricopeptide repeat protein | EZ437_08755 | Not Available | Negative | 2003224 - 2004369 | 43709.1 |
| hypothetical protein | EZ437_08760 | Not Available | Positive | 2004570 - 2004869 | 11435.7 |
| pas domain-containing sensor histidine kinase | EZ437_08765 | Not Available | Negative | 2004910 - 2006670 | 67495.3 |
| port family protein | EZ437_08770 | Not Available | Positive | 2006818 - 2007408 | 20835.8 |
| hypothetical protein | EZ437_08775 | Not Available | Positive | 2007519 - 2007800 | 10625.9 |
| yihy/virulence factor brkb family protein | EZ437_08780 | Not Available | Negative | 2007797 - 2008714 | 34888.9 |
| 4-hydroxyphenylpyruvate dioxygenase | EZ437_08785 | Not Available | Negative | 2008841 - 2009971 | 42479.3 |
| homogentisate 1,2-dioxygenase | EZ437_08790 | Not Available | Negative | 2010164 - 2011321 | 44231.5 |
| fumarylacetoacetate hydrolase family protein | EZ437_08795 | Not Available | Positive | 2011653 - 2012651 | 36646.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

