Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | EZ437_08495 | Not Available | Positive | 1933487 - 1934392 | 33725.4 |
| hypothetical protein | EZ437_08500 | Not Available | Positive | 1934389 - 1934802 | 15935.4 |
| pasta domain-containing protein | EZ437_08505 | Not Available | Positive | 1934792 - 1936894 | 77056.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | EZ437_08510 | Not Available | Positive | 1936896 - 1938353 | 53415.2 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | EZ437_08515 | Not Available | Positive | 1938353 - 1939606 | 46835.5 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | EZ437_08520 | Not Available | Positive | 1939606 - 1940949 | 49654.4 |
| ftsw/roda/spove family cell cycle protein | EZ437_08525 | Not Available | Positive | 1940960 - 1942120 | 41963.9 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | EZ437_08530 | Not Available | Positive | 1942131 - 1943252 | 40451.8 |
| udp-n-acetylmuramate--l-alanine ligase | EZ437_08535 | Not Available | Positive | 1943243 - 1944595 | 49856.1 |
| cell division protein ftsa | EZ437_08545 | Not Available | Positive | 1945601 - 1946959 | 49417.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

