Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EZ437_00730 | Not Available | Positive | 164948 - 165769 | 28731.3 |
| duf4974 domain-containing protein | EZ437_00735 | Not Available | Positive | 165931 - 167055 | 41293.9 |
| hypothetical protein | EZ437_00740 | Not Available | Positive | 167228 - 167650 | 15290.7 |
| rna polymerase sigma factor | EZ437_00745 | Not Available | Negative | 167888 - 168418 | 20267.2 |
| udp-n-acetylmuramate dehydrogenase | EZ437_00750 | Not Available | Negative | 168588 - 169610 | 36907.1 |
| tetr/acrr family transcriptional regulator | EZ437_00755 | Not Available | Positive | 169664 - 170266 | 23306.6 |
| tetr/acrr family transcriptional regulator | EZ437_00760 | Not Available | Positive | 170389 - 170994 | 22973.1 |
| tolc family protein | EZ437_00765 | Not Available | Positive | 171012 - 172355 | 49980.8 |
| efflux rnd transporter periplasmic adaptor subunit | EZ437_00770 | Not Available | Positive | 172352 - 173419 | 38289.1 |
| efflux rnd transporter permease subunit | EZ437_00775 | Not Available | Positive | 173426 - 176620 | 116215.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

