Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | EZ437_07790 | Not Available | Negative | 1755795 - 1756355 | 22058.4 |
| transketolase family protein | EZ437_07795 | Not Available | Negative | 1756376 - 1757335 | 34599.8 |
| transketolase | EZ437_07800 | Not Available | Negative | 1757347 - 1758192 | 30806.6 |
| hypothetical protein | EZ437_07805 | Not Available | Positive | 1758538 - 1758933 | 14532.9 |
| efflux rnd transporter permease subunit | EZ437_07810 | Not Available | Positive | 1759062 - 1760360 | 48301.7 |
| efflux rnd transporter permease subunit | EZ437_07815 | Not Available | Positive | 1760357 - 1762294 | 71494.4 |
| hypothetical protein | EZ437_07820 | Not Available | Positive | 1762281 - 1763531 | 48377.5 |
| biotin/lipoyl-binding protein | EZ437_07825 | Not Available | Positive | 1763509 - 1764744 | 44653.0 |
| efflux rnd transporter periplasmic adaptor subunit | EZ437_07830 | Not Available | Positive | 1764748 - 1765977 | 45176.5 |
| duf3347 domain-containing protein | EZ437_07835 | Not Available | Positive | 1765996 - 1766559 | 19727.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

