Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoserine/phosphohydroxythreonine transaminase | EZ437_07740 | Not Available | Negative | 1744360 - 1745469 | 41464.9 |
| hypothetical protein | EZ437_07745 | Not Available | Negative | 1745662 - 1746084 | 15807.3 |
| malate dehydrogenase | EZ437_07750 | Not Available | Negative | 1746109 - 1747047 | 33165.2 |
| hypothetical protein | EZ437_07755 | Not Available | Positive | 1747232 - 1747711 | 18833.7 |
| dna polymerase iii subunit alpha | EZ437_07760 | Not Available | Positive | 1747770 - 1752197 | 167328.0 |
| thioredoxin | EZ437_07765 | Not Available | Positive | 1752271 - 1752588 | 11622.0 |
| duf58 domain-containing protein | EZ437_07770 | Not Available | Positive | 1752654 - 1753574 | 35578.6 |
| aspartate aminotransferase family protein | EZ437_07775 | Not Available | Negative | 1753552 - 1754745 | 43490.0 |
| hypothetical protein | EZ437_07780 | Not Available | Negative | 1754761 - 1755222 | 18336.1 |
| hypothetical protein | EZ437_07785 | Not Available | Negative | 1755236 - 1755760 | 19319.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

