Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | EZ437_07690 | Not Available | Negative | 1734687 - 1736093 | 53171.6 |
| threonylcarbamoyl-amp synthase | EZ437_07695 | Not Available | Negative | 1736119 - 1736685 | 20919.1 |
| glycosyltransferase family 1 protein | EZ437_07700 | Not Available | Negative | 1736688 - 1737815 | 42579.9 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | EZ437_07705 | Not Available | Negative | 1737820 - 1738638 | 29690.3 |
| rna-binding s4 domain-containing protein | EZ437_07710 | Not Available | Positive | 1738719 - 1739120 | 15228.4 |
| ecsc family protein | EZ437_07715 | Not Available | Negative | 1739117 - 1739842 | 27215.2 |
| omph family outer membrane protein | EZ437_07720 | Not Available | Negative | 1739948 - 1740532 | 21748.7 |
| dna topoisomerase (atp-hydrolyzing) subunit b | EZ437_07725 | Not Available | Positive | 1740754 - 1742712 | 72429.2 |
| lrp/asnc family transcriptional regulator | EZ437_07730 | Not Available | Positive | 1742876 - 1743349 | 17789.9 |
| rna polymerase sigma factor rpod/siga | EZ437_07735 | Not Available | Negative | 1743476 - 1744342 | 32884.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

