Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatine deiminase family protein | EZ437_07140 | Not Available | Positive | 1619440 - 1620507 | 39915.9 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | EZ437_07145 | Not Available | Positive | 1620549 - 1621292 | 26208.7 |
| vwa domain-containing protein | EZ437_07150 | Not Available | Positive | 1621370 - 1623454 | 77666.4 |
| trimeric intracellular cation channel family protein | EZ437_07155 | Not Available | Positive | 1623466 - 1624077 | 22377.4 |
| septum formation initiator family protein | EZ437_07160 | Not Available | Negative | 1624116 - 1624415 | 11926.3 |
| glucuronyl hydrolase | EZ437_07165 | Not Available | Positive | 1624518 - 1625729 | 45267.8 |
| phosphopyruvate hydratase | EZ437_07170 | Not Available | Negative | 1625948 - 1627246 | 46511.1 |
| class i sam-dependent methyltransferase | EZ437_07175 | Not Available | Negative | 1627425 - 1628138 | 26885.0 |
| abc transporter permease | EZ437_07180 | Not Available | Negative | 1628242 - 1629333 | 39718.3 |
| abc transporter atp-binding protein | EZ437_07185 | Not Available | Negative | 1629341 - 1630111 | 28628.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

