Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | EZ437_06990 | Not Available | Negative | 1582066 - 1582683 | 23766.6 |
| tolc family protein | EZ437_06995 | Not Available | Positive | 1582771 - 1584195 | 52750.3 |
| efflux rnd transporter periplasmic adaptor subunit | EZ437_07000 | Not Available | Positive | 1584247 - 1585584 | 47778.9 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | EZ437_07005 | Not Available | Positive | 1585667 - 1586665 | 37241.2 |
| dead/deah box helicase | EZ437_07010 | Not Available | Negative | 1586727 - 1588616 | 69265.9 |
| duf4293 family protein | EZ437_07015 | Not Available | Negative | 1588701 - 1589168 | 16918.3 |
| trna pseudouridine(38-40) synthase trua | EZ437_07020 | Not Available | Positive | 1589254 - 1590027 | 29309.8 |
| abc transporter atp-binding protein | EZ437_07025 | Not Available | Positive | 1590031 - 1591800 | 66554.0 |
| fad-dependent oxidoreductase | EZ437_07030 | Not Available | Negative | 1591918 - 1593570 | 62114.3 |
| sgnh/gdsl hydrolase family protein | EZ437_07035 | Not Available | Negative | 1593573 - 1594325 | 27429.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

