Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | EZ437_06485 | Not Available | Negative | 1479962 - 1480513 | 21193.7 |
| lipoyl synthase | EZ437_06490 | Not Available | Negative | 1480592 - 1481470 | 32989.8 |
| isoquinoline 1-oxidoreductase | EZ437_06495 | Not Available | Negative | 1481548 - 1483605 | 74419.3 |
| (2fe-2s)-binding protein | EZ437_06500 | Not Available | Negative | 1483642 - 1484106 | 16071.6 |
| osmc family peroxiredoxin | EZ437_06505 | Not Available | Positive | 1484197 - 1484601 | 14558.4 |
| bacillithiol system redox-active protein ytxj | EZ437_06510 | Not Available | Negative | 1484591 - 1484923 | 12601.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | EZ437_06515 | Not Available | Negative | 1485138 - 1485629 | 17147.6 |
| tetratricopeptide repeat protein | EZ437_06520 | Not Available | Negative | 1485703 - 1486371 | 24368.9 |
| dna replication and repair protein recf | EZ437_06525 | Not Available | Positive | 1486528 - 1487631 | 42589.5 |
| duf721 domain-containing protein | EZ437_06530 | Not Available | Positive | 1487713 - 1488003 | 10995.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

