Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna lysidine(34) synthetase tils | EZ437_06435 | Not Available | Positive | 1466953 - 1468287 | 50480.1 |
| hypothetical protein | EZ437_06440 | Not Available | Positive | 1468363 - 1468845 | 18818.8 |
| n-acetyl-alpha-d-glucosaminyl l-malate synthase bsha | EZ437_06445 | Not Available | Positive | 1468927 - 1470075 | 42516.2 |
| lactonase family protein | EZ437_06450 | Not Available | Negative | 1470193 - 1471296 | 39489.8 |
| pseudouridine synthase | EZ437_06455 | Not Available | Negative | 1471300 - 1472802 | 57208.1 |
| lytic transglycosylase domain-containing protein | EZ437_06460 | Not Available | Positive | 1473300 - 1474100 | 30067.7 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | EZ437_06465 | Not Available | Positive | 1474184 - 1475236 | 39879.5 |
| excinuclease abc subunit uvra | EZ437_06470 | Not Available | Positive | 1475339 - 1478182 | 106069.0 |
| nad(p)h-hydrate dehydratase | EZ437_06475 | Not Available | Positive | 1478190 - 1479113 | 32879.7 |
| anti-sigma factor | EZ437_06480 | Not Available | Negative | 1479110 - 1479961 | 31171.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

