Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease | EZ437_06385 | Not Available | Positive | 1455933 - 1457051 | 42548.6 |
| cysteine--trna ligase | EZ437_06390 | Not Available | Positive | 1457070 - 1458530 | 55049.8 |
| nuclear transport factor 2 family protein | EZ437_06395 | Not Available | Positive | 1458549 - 1459397 | 31213.9 |
| glycerophosphodiester phosphodiesterase | EZ437_06400 | Not Available | Positive | 1459404 - 1460285 | 33311.5 |
| aaa family atpase | EZ437_06405 | Not Available | Negative | 1460277 - 1461239 | 35678.1 |
| peptidylprolyl isomerase | EZ437_06410 | Not Available | Negative | 1461245 - 1462618 | 52257.6 |
| hypothetical protein | EZ437_06415 | Not Available | Negative | 1462684 - 1463187 | 19701.6 |
| hypothetical protein | EZ437_06420 | Not Available | Positive | 1463297 - 1463884 | 21532.9 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | EZ437_06425 | Not Available | Positive | 1463884 - 1464462 | 21451.6 |
| hypothetical protein | EZ437_06430 | Not Available | Negative | 1464434 - 1466923 | 91656.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

