Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent oxidoreductase | EZ437_06335 | Not Available | Negative | 1444176 - 1444808 | 23263.6 |
| peptide-methionine (s)-s-oxide reductase | EZ437_06340 | Not Available | Negative | 1445210 - 1445809 | 22315.7 |
| isopenicillin n synthase family oxygenase | EZ437_06345 | Not Available | Positive | 1446052 - 1447014 | 36187.7 |
| hepn domain-containing protein | EZ437_06350 | Not Available | Negative | 1447266 - 1448168 | 34011.4 |
| hypothetical protein | EZ437_06355 | Not Available | Negative | 1448193 - 1449395 | 47457.2 |
| helix-turn-helix transcriptional regulator | EZ437_06360 | Not Available | Positive | 1449592 - 1450209 | 23374.9 |
| beta-n-acetylglucosaminidase | EZ437_06365 | Not Available | Negative | 1450530 - 1452326 | 66142.9 |
| dna mismatch repair endonuclease mutl | EZ437_06370 | Not Available | Positive | 1452435 - 1454300 | 69477.3 |
| rhomboid family intramembrane serine protease | EZ437_06375 | Not Available | Positive | 1454302 - 1455048 | 27825.3 |
| rhomboid family intramembrane serine protease | EZ437_06380 | Not Available | Positive | 1455041 - 1455925 | 33026.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

