Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diacylglycerol kinase family protein | EZ437_06285 | Not Available | Negative | 1429129 - 1429485 | 13161.5 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | EZ437_06290 | Not Available | Positive | 1429587 - 1430537 | 35376.2 |
| t9ss type b sorting domain-containing protein | EZ437_06295 | Not Available | Positive | 1430636 - 1433314 | 98079.9 |
| duf2130 domain-containing protein | EZ437_06300 | Not Available | Negative | 1433315 - 1434541 | 47928.4 |
| metal-dependent transcriptional regulator | EZ437_06305 | Not Available | Negative | 1434650 - 1435312 | 24998.1 |
| tonb-dependent receptor | EZ437_06310 | Not Available | Positive | 1435457 - 1437715 | 84374.2 |
| hypothetical protein | EZ437_06315 | Not Available | Positive | 1437739 - 1438881 | 41928.4 |
| padr family transcriptional regulator | EZ437_06320 | Not Available | Positive | 1439367 - 1439693 | 12264.0 |
| pspc domain-containing protein | EZ437_06325 | Not Available | Positive | 1439693 - 1441234 | 58454.4 |
| carboxypeptidase regulatory-like domain-containing protein | EZ437_06330 | Not Available | Negative | 1441240 - 1443966 | 100372.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

