Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | EZ437_06235 | Not Available | Negative | 1421525 - 1422697 | 42976.4 |
| polyprenyltransferase | EZ437_06240 | Not Available | Negative | 1422714 - 1423571 | 30542.5 |
| hydrolase tatd | EZ437_06245 | Not Available | Negative | 1423606 - 1424592 | 36975.9 |
| hypothetical protein | EZ437_06250 | Not Available | Negative | 1424604 - 1425314 | 27044.6 |
| hypothetical protein | EZ437_06255 | Not Available | Negative | 1425327 - 1425698 | 14224.7 |
| atp-binding protein | EZ437_06260 | Not Available | Positive | 1425877 - 1426701 | 29756.1 |
| glycoside hydrolase family 16 protein | EZ437_06265 | Not Available | Negative | 1426787 - 1427998 | 45175.8 |
| Trna-val | Not Available | Not Available | Positive | 1428137 - 1428214 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 1428256 - 1428333 | Not Available |
| dna repair protein reco | EZ437_06280 | Not Available | Negative | 1428414 - 1429139 | 28045.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

