Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | EZ437_06180 | Not Available | Negative | 1410150 - 1410857 | 26440.9 |
| serine--trna ligase | EZ437_06185 | Not Available | Positive | 1410896 - 1412167 | 47573.8 |
| hypothetical protein | EZ437_06190 | Not Available | Negative | 1412269 - 1412583 | 11623.6 |
| duf541 domain-containing protein | EZ437_06195 | Not Available | Negative | 1412705 - 1413409 | 26168.7 |
| lipoprotein signal peptidase | EZ437_06200 | Not Available | Negative | 1413493 - 1414095 | 22881.2 |
| trar/dksa family transcriptional regulator | EZ437_06205 | Not Available | Negative | 1414095 - 1414475 | 14455.1 |
| isoleucine--trna ligase | EZ437_06210 | Not Available | Negative | 1414481 - 1417873 | 128725.0 |
| duf2200 domain-containing protein | EZ437_06215 | Not Available | Negative | 1418091 - 1418456 | 13902.0 |
| alkaline phosphatase family protein | EZ437_06225 | Not Available | Negative | 1418937 - 1420289 | 50811.9 |
| xylose isomerase | EZ437_06230 | Not Available | Negative | 1420314 - 1421522 | 45671.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

