Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ437_05875 | Not Available | Negative | 1342733 - 1343023 | 10666.3 |
| duf1963 domain-containing protein | EZ437_05880 | Not Available | Positive | 1343360 - 1343893 | 20773.0 |
| hypothetical protein | EZ437_05885 | Not Available | Negative | 1344199 - 1344906 | 26226.6 |
| hypothetical protein | EZ437_05890 | Not Available | Negative | 1344912 - 1345190 | 10181.2 |
| xre family transcriptional regulator | EZ437_05895 | Not Available | Positive | 1345478 - 1345822 | 13229.1 |
| type ii toxin-antitoxin system hipa family toxin | EZ437_05900 | Not Available | Positive | 1345816 - 1347096 | 48153.9 |
| dna-3-methyladenine glycosylase i | EZ437_05905 | Not Available | Positive | 1347789 - 1348340 | 21253.7 |
| redoxin domain-containing protein | EZ437_05910 | Not Available | Negative | 1348320 - 1349195 | 32701.0 |
| dinb family protein | EZ437_05915 | Not Available | Positive | 1349371 - 1349865 | 18804.4 |
| duf4038 domain-containing protein | EZ437_05920 | Not Available | Positive | 1349929 - 1351242 | 49579.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

