Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5077 domain-containing protein | EZ437_05770 | Not Available | Negative | 1311559 - 1312863 | 47977.5 |
| phage holin family protein | EZ437_05775 | Not Available | Negative | 1312944 - 1313276 | 11948.6 |
| radical sam family heme chaperone hemw | EZ437_05780 | Not Available | Negative | 1313288 - 1314427 | 43342.4 |
| hypothetical protein | EZ437_05785 | Not Available | Negative | 1314445 - 1315026 | 22511.8 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | EZ437_05790 | Not Available | Positive | 1315293 - 1317848 | 96322.1 |
| 2,6-beta-d-fructofuranosidase | EZ437_05795 | Not Available | Negative | 1317937 - 1319589 | 63318.9 |
| ragb/susd family nutrient uptake outer membrane protein | EZ437_05800 | Not Available | Negative | 1319633 - 1321351 | 64175.5 |
| tonb-dependent receptor | EZ437_05805 | Not Available | Negative | 1321371 - 1324451 | 112869.0 |
| carbohydrate kinase | EZ437_05810 | Not Available | Negative | 1324463 - 1325359 | 33060.5 |
| mfs transporter | EZ437_05815 | Not Available | Negative | 1325372 - 1326703 | 48742.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

