Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protoheme ix farnesyltransferase | EZ437_05620 | Not Available | Positive | 1279848 - 1280726 | 32493.8 |
| heme-copper oxidase subunit iii | EZ437_05625 | Not Available | Positive | 1280733 - 1281323 | 22209.7 |
| cytochrome oxidase subunit iii | EZ437_05630 | Not Available | Positive | 1281354 - 1282061 | 26803.9 |
| caa(3)-type oxidase | EZ437_05635 | Not Available | Positive | 1282080 - 1282439 | 13879.4 |
| sco family protein | EZ437_05640 | Not Available | Positive | 1282436 - 1283149 | 27128.5 |
| duf420 domain-containing protein | EZ437_05645 | Not Available | Positive | 1283160 - 1283696 | 20101.8 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EZ437_05650 | Not Available | Negative | 1283699 - 1284253 | 20538.9 |
| hypothetical protein | EZ437_05655 | Not Available | Negative | 1284278 - 1284460 | 6774.2 |
| ytxh domain-containing protein | EZ437_05660 | Not Available | Negative | 1284484 - 1284780 | 10552.4 |
| phospholipase c, phosphocholine-specific | EZ437_05665 | Not Available | Positive | 1285126 - 1287657 | 95029.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

