Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2157 domain-containing protein | EZ437_00480 | Not Available | Negative | 110393 - 111364 | 36062.4 |
| pyridoxine 5'-phosphate synthase | EZ437_00485 | Not Available | Positive | 111412 - 112131 | 26603.8 |
| glycine dehydrogenase (aminomethyl-transferring) | EZ437_00490 | Not Available | Positive | 112183 - 115059 | 104966.0 |
| ycei family protein | EZ437_00495 | Not Available | Positive | 115145 - 115738 | 21147.8 |
| response regulator | EZ437_00500 | Not Available | Positive | 115866 - 116267 | 15237.7 |
| mbl fold metallo-hydrolase | EZ437_00505 | Not Available | Negative | 116257 - 117030 | 29126.5 |
| single-stranded-dna-specific exonuclease recj | EZ437_00510 | Not Available | Positive | 117104 - 118810 | 63472.3 |
| lps export abc transporter atp-binding protein | EZ437_00515 | Not Available | Positive | 118817 - 119551 | 27352.3 |
| gh3 auxin-responsive promoter family protein | EZ437_00520 | Not Available | Positive | 119561 - 121081 | 59064.4 |
| cbs domain-containing protein | EZ437_00525 | Not Available | Positive | 121139 - 121567 | 15841.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

