Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EZ437_05415 | Not Available | Positive | 1227812 - 1230622 | 104225.0 |
| glpgli family protein | EZ437_05420 | Not Available | Positive | 1230627 - 1231403 | 28979.9 |
| response regulator transcription factor | EZ437_05425 | Not Available | Negative | 1231400 - 1232095 | 26668.6 |
| hamp domain-containing histidine kinase | EZ437_05430 | Not Available | Negative | 1232107 - 1233960 | 70823.9 |
| srpbcc domain-containing protein | EZ437_05435 | Not Available | Positive | 1234181 - 1234624 | 16505.4 |
| ribose 5-phosphate isomerase a | EZ437_05440 | Not Available | Negative | 1234621 - 1235322 | 25232.7 |
| carboxypeptidase-like regulatory domain-containing protein | EZ437_05445 | Not Available | Positive | 1235434 - 1236507 | 40859.9 |
| phosphoribosylamine--glycine ligase | EZ437_05450 | Not Available | Positive | 1236559 - 1237830 | 45229.3 |
| nipsnap family containing protein | EZ437_05455 | Not Available | Positive | 1237852 - 1238634 | 29445.4 |
| hypothetical protein | EZ437_05460 | Not Available | Negative | 1238650 - 1240233 | 59103.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

