Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| blai/meci/copy family transcriptional regulator | EZ437_05365 | Not Available | Positive | 1215925 - 1216302 | 14678.9 |
| tonb family protein | EZ437_05370 | Not Available | Positive | 1216299 - 1218434 | 79824.4 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | EZ437_05375 | Not Available | Negative | 1218510 - 1219280 | 27898.3 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | EZ437_05380 | Not Available | Negative | 1219307 - 1221286 | 73379.0 |
| succinate dehydrogenase cytochrome b subunit | EZ437_05385 | Not Available | Negative | 1221311 - 1221991 | 25087.2 |
| hypothetical protein | EZ437_05390 | Not Available | Positive | 1222155 - 1222376 | 8238.69 |
| voc family protein | EZ437_05395 | Not Available | Positive | 1222450 - 1222866 | 15369.0 |
| do family serine endopeptidase | EZ437_05400 | Not Available | Negative | 1222941 - 1224464 | 52917.8 |
| diaminopimelate epimerase | EZ437_05405 | Not Available | Positive | 1224638 - 1225423 | 29066.1 |
| helicase | EZ437_05410 | Not Available | Negative | 1225427 - 1227718 | 85835.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

