Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase | EZ437_05160 | Not Available | Positive | 1168146 - 1169444 | 49386.8 |
| tryptophan 2,3-dioxygenase | EZ437_05165 | Not Available | Positive | 1169490 - 1170452 | 37237.7 |
| branched-chain amino acid aminotransferase | EZ437_05170 | Not Available | Positive | 1170492 - 1171556 | 39252.7 |
| s9 family peptidase | EZ437_05175 | Not Available | Positive | 1172176 - 1174323 | 81486.7 |
| glycoside hydrolase family 16 protein | EZ437_05180 | Not Available | Positive | 1174326 - 1175123 | 30026.6 |
| hypothetical protein | EZ437_05185 | Not Available | Negative | 1175128 - 1176927 | 69216.8 |
| hypothetical protein | EZ437_05195 | Not Available | Negative | 1178877 - 1179716 | 32249.5 |
| tonb-dependent receptor | EZ437_05200 | Not Available | Negative | 1179718 - 1182273 | 97845.1 |
| duf4974 domain-containing protein | EZ437_05205 | Not Available | Negative | 1182254 - 1183222 | 36366.5 |
| rna polymerase sigma-70 factor | EZ437_05210 | Not Available | Negative | 1183224 - 1183832 | 24050.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

