Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparaginase | EZ437_04960 | Not Available | Positive | 1126669 - 1127511 | 30057.3 |
| hypothetical protein | EZ437_04965 | Not Available | Positive | 1127543 - 1128229 | 25443.4 |
| tail-specific protease | EZ437_04970 | Not Available | Positive | 1128363 - 1130534 | 80731.1 |
| hypothetical protein | EZ437_04975 | Not Available | Positive | 1130680 - 1130865 | 6486.19 |
| capa family protein | EZ437_04980 | Not Available | Negative | 1130862 - 1131989 | 41409.0 |
| glycoside hydrolase | EZ437_04985 | Not Available | Negative | 1132021 - 1132575 | 20870.1 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | EZ437_04990 | Not Available | Positive | 1132983 - 1133978 | 37211.4 |
| pyruvate dehydrogenase | EZ437_04995 | Not Available | Positive | 1134008 - 1135666 | 58187.8 |
| histidine--trna ligase | EZ437_05000 | Not Available | Positive | 1135842 - 1137227 | 50994.6 |
| nuclear transport factor 2 family protein | EZ437_05005 | Not Available | Negative | 1137224 - 1137700 | 17810.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

