Pedobacter changchengzhani

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Pedobacter changchengzhani is a species of bacteria characterized by the presence of flagella, which are appendages that enable motility. The organism has been cataloged with a single replicon, indicating it possesses one complete circular chromosome. The genetic information for this species can be found in the accession number SJCY00000000.1, which serves as a reference for researchers studying its genomic characteristics. This bacterium is part of the Pedobacter genus, which is known for its diverse ecological roles, particularly in soil and aquatic environments. The presence of flagella suggests that Pedobacter changchengzhani can actively move toward nutrients or away from harmful substances, contributing to its survival and adaptability in various habitats. The single replicon structure may imply a streamlined genetic organization, allowing for efficient replication and adaptation. Understanding the motility and genetic makeup of Pedobacter changchengzhani can provide insights into its ecological interactions and potential functions in biogeochemical cycles. This highlights the importance of such microorganisms in maintaining ecosystem health and stability, as they can play roles in nutrient cycling and organic matter decomposition.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter changchengzhani
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter changchengzhani strain E01020 Scaffold35, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3296 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamine-hydrolyzing gmp synthaseEZJ43_15480Not AvailablePositive3545797 - 354732656515.6
amino acid abc transporter substrate-binding proteinEZJ43_15485Not AvailablePositive3547488 - 354870246099.8
rsmb/nop family class i sam-dependent rna methyltransferaseEZJ43_15490Not AvailablePositive3548721 - 354989045018.4
hypothetical proteinEZJ43_15495Not AvailableNegative3550634 - 355136827457.9
pseudouridylate synthaseEZJ43_15500Not AvailableNegative3551408 - 355209126421.0
histone deacetylaseEZJ43_15505Not AvailableNegative3552421 - 355332333719.6
kynureninaseEZJ43_15510Not AvailableNegative3553316 - 355461448923.8
pyridoxamine 5'-phosphate oxidaseEZJ43_15515Not AvailableNegative3554683 - 355517118356.8
gaf domain-containing proteinEZJ43_15520Not AvailableNegative3555329 - 355580817517.9
s46 family peptidaseEZJ43_15525Not AvailablePositive3555968 - 355813680912.4

Displaying genes 3051 – 3060 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.