Pedobacter changchengzhani

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Pedobacter changchengzhani is a species of bacteria characterized by the presence of flagella, which are appendages that enable motility. The organism has been cataloged with a single replicon, indicating it possesses one complete circular chromosome. The genetic information for this species can be found in the accession number SJCY00000000.1, which serves as a reference for researchers studying its genomic characteristics. This bacterium is part of the Pedobacter genus, which is known for its diverse ecological roles, particularly in soil and aquatic environments. The presence of flagella suggests that Pedobacter changchengzhani can actively move toward nutrients or away from harmful substances, contributing to its survival and adaptability in various habitats. The single replicon structure may imply a streamlined genetic organization, allowing for efficient replication and adaptation. Understanding the motility and genetic makeup of Pedobacter changchengzhani can provide insights into its ecological interactions and potential functions in biogeochemical cycles. This highlights the importance of such microorganisms in maintaining ecosystem health and stability, as they can play roles in nutrient cycling and organic matter decomposition.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter changchengzhani
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter changchengzhani strain E01020 Scaffold35, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3296 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein assembly factor bamaEZJ43_15430Not AvailablePositive3534948 - 353749495190.1
omph family outer membrane proteinEZJ43_15435Not AvailablePositive3537586 - 353811620466.5
omph family outer membrane proteinEZJ43_15440Not AvailablePositive3538176 - 353875120401.4
glutamate racemaseEZJ43_15445Not AvailablePositive3538973 - 353979430409.9
amidophosphoribosyltransferaseEZJ43_15450Not AvailablePositive3539948 - 354184972335.6
lyse family translocatorEZJ43_15455Not AvailableNegative3542154 - 354278023141.1
mfs transporterEZJ43_15460Not AvailablePositive3542929 - 354453656864.4
dcmp deaminase family proteinEZJ43_15465Not AvailablePositive3544632 - 354505715120.0
prevent-host-death proteinEZJ43_15470Not AvailablePositive3545103 - 35453398834.84
type ii toxin-antitoxin system vapc family toxinEZJ43_15475Not AvailablePositive3545336 - 354573415165.4

Displaying genes 3041 – 3050 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.