Pedobacter changchengzhani

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Pedobacter changchengzhani is a species of bacteria characterized by the presence of flagella, which are appendages that enable motility. The organism has been cataloged with a single replicon, indicating it possesses one complete circular chromosome. The genetic information for this species can be found in the accession number SJCY00000000.1, which serves as a reference for researchers studying its genomic characteristics. This bacterium is part of the Pedobacter genus, which is known for its diverse ecological roles, particularly in soil and aquatic environments. The presence of flagella suggests that Pedobacter changchengzhani can actively move toward nutrients or away from harmful substances, contributing to its survival and adaptability in various habitats. The single replicon structure may imply a streamlined genetic organization, allowing for efficient replication and adaptation. Understanding the motility and genetic makeup of Pedobacter changchengzhani can provide insights into its ecological interactions and potential functions in biogeochemical cycles. This highlights the importance of such microorganisms in maintaining ecosystem health and stability, as they can play roles in nutrient cycling and organic matter decomposition.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter changchengzhani
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter changchengzhani strain E01020 Scaffold35, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3296 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4a-hydroxytetrahydrobiopterin dehydrataseEZJ43_11645Not AvailableNegative2735000 - 27352369228.08
is200/is605 family transposaseEZJ43_11650Not AvailableNegative2736547 - 273700818044.4
magnesium/cobalt transporter coraEZJ43_11655Not AvailableNegative2738536 - 273965443633.0
hypothetical proteinEZJ43_11660Not AvailableNegative2739662 - 274027324494.4
lauroyl acyltransferaseEZJ43_11665Not AvailablePositive2740314 - 274119234436.4
glycosyltransferase family 2 proteinEZJ43_11670Not AvailablePositive2741189 - 274220838785.4
type ii 3-dehydroquinate dehydrataseEZJ43_11675Not AvailableNegative2742406 - 274282515389.6
site-specific tyrosine recombinase xerdEZJ43_11680Not AvailablePositive2742918 - 274381733755.4
dead/deah box helicaseEZJ43_11685Not AvailableNegative2743887 - 274518248462.8
hypothetical proteinEZJ43_11690Not AvailableNegative2745339 - 27455337503.06

Displaying genes 2301 – 2310 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.