Pedobacter changchengzhani

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Pedobacter changchengzhani is a species of bacteria characterized by the presence of flagella, which are appendages that enable motility. The organism has been cataloged with a single replicon, indicating it possesses one complete circular chromosome. The genetic information for this species can be found in the accession number SJCY00000000.1, which serves as a reference for researchers studying its genomic characteristics. This bacterium is part of the Pedobacter genus, which is known for its diverse ecological roles, particularly in soil and aquatic environments. The presence of flagella suggests that Pedobacter changchengzhani can actively move toward nutrients or away from harmful substances, contributing to its survival and adaptability in various habitats. The single replicon structure may imply a streamlined genetic organization, allowing for efficient replication and adaptation. Understanding the motility and genetic makeup of Pedobacter changchengzhani can provide insights into its ecological interactions and potential functions in biogeochemical cycles. This highlights the importance of such microorganisms in maintaining ecosystem health and stability, as they can play roles in nutrient cycling and organic matter decomposition.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter changchengzhani
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter changchengzhani strain E01020 Scaffold35, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3296 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEZJ43_10770Not AvailablePositive2525885 - 252661628633.1
nad(p)/fad-dependent oxidoreductaseEZJ43_10775Not AvailableNegative2526733 - 252792343408.2
5-(carboxyamino)imidazole ribonucleotide synthaseEZJ43_10780Not AvailablePositive2528159 - 252929842446.4
5-(carboxyamino)imidazole ribonucleotide mutaseEZJ43_10785Not AvailablePositive2529377 - 252994019573.7
cell filamentation protein ficEZJ43_10790Not AvailablePositive2529999 - 253054421253.9
yqge/algh family proteinEZJ43_10795Not AvailableNegative2530724 - 253128720983.8
pyridoxamine 5'-phosphate oxidaseEZJ43_10800Not AvailablePositive2531332 - 253198224935.7
3-hydroxybutyryl-coa dehydrogenaseEZJ43_10805Not AvailablePositive2532032 - 253291931881.8
holliday junction branch migration dna helicase ruvbEZJ43_10810Not AvailablePositive2533067 - 253408937563.1
gnat family n-acetyltransferaseEZJ43_10815Not AvailablePositive2534383 - 253589157656.1

Displaying genes 2131 – 2140 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.