Pedobacter changchengzhani

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Sphingobacteriia

Order

Sphingobacteriales

Family

Sphingobacteriaceae

Genus

Pedobacter

Description

Pedobacter changchengzhani is a species of bacteria characterized by the presence of flagella, which are appendages that enable motility. The organism has been cataloged with a single replicon, indicating it possesses one complete circular chromosome. The genetic information for this species can be found in the accession number SJCY00000000.1, which serves as a reference for researchers studying its genomic characteristics. This bacterium is part of the Pedobacter genus, which is known for its diverse ecological roles, particularly in soil and aquatic environments. The presence of flagella suggests that Pedobacter changchengzhani can actively move toward nutrients or away from harmful substances, contributing to its survival and adaptability in various habitats. The single replicon structure may imply a streamlined genetic organization, allowing for efficient replication and adaptation. Understanding the motility and genetic makeup of Pedobacter changchengzhani can provide insights into its ecological interactions and potential functions in biogeochemical cycles. This highlights the importance of such microorganisms in maintaining ecosystem health and stability, as they can play roles in nutrient cycling and organic matter decomposition.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassSphingobacteriia
OrderSphingobacteriales
FamilySphingobacteriaceae
GenusPedobacter
SpeciesPedobacter changchengzhani
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pedobacter changchengzhani strain E01020 Scaffold35, whole genome

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3296 genes

Non-Coding Genes

46 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEZJ43_05890Not AvailablePositive1349601 - 135047032278.8
rna-binding s4 domain-containing proteinEZJ43_05895Not AvailablePositive1350526 - 135092414936.1
ecsc family proteinEZJ43_05900Not AvailableNegative1351000 - 135174028275.9
nucleoside deaminaseEZJ43_05905Not AvailableNegative1351818 - 135224315498.6
omph family outer membrane proteinEZJ43_05910Not AvailableNegative1352329 - 135293722786.9
dna topoisomerase (atp-hydrolyzing) subunit bEZJ43_05915Not AvailablePositive1353484 - 135544272186.0
tigr01212 family radical sam proteinEZJ43_05920Not AvailablePositive1355646 - 135659636196.6
ammonium transporterEZJ43_05925Not AvailablePositive1356979 - 135836449018.7
porinEZJ43_05930Not AvailablePositive1358425 - 135945036422.1
duf4468 domain-containing proteinEZJ43_05935Not AvailablePositive1359522 - 136010022260.8

Displaying genes 1171 – 1180 of 3342 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.