Rhodococcus sp. NJ-530

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. NJ-530 is a notable bacterium characterized by the presence of flagella, which enables motility. This trait is significant for its ecological interactions, as motility can enhance its ability to explore diverse environments and access nutrients. The organism possesses a complex genomic architecture with five replicons, indicating a potentially versatile genetic repertoire that may contribute to its adaptability and metabolic capabilities. The genomic data for Rhodococcus sp. NJ-530 can be accessed through multiple accession numbers: NZ_CP034156.1, NZ_CP034154.1, NZ_CP034152.1, NZ_CP034153.1, and NZ_CP034155.1. These accession numbers correspond to various segments of its genome, which may encompass genes involved in biodegradation, bioremediation, or other significant metabolic pathways. Given the characteristics of Rhodococcus species, NJ-530 could play a critical role in environmental microbiology, particularly in the degradation of pollutants or in bioremediation efforts. The presence of flagella may facilitate its movement toward contaminated sites, enhancing its effectiveness in bioremediation processes. Thus, Rhodococcus sp. NJ-530 represents a valuable organism for further study in microbial ecology and applications in environmental management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. NJ-530
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence.

Gene Summary

Adenine Count

107598 bp

Thymine Count

108683 bp

Guanine Count

174336 bp

Cytosine Count

174750 bp

Genome Length

565367 bp

Protein-coding Genes

599 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rdgb/ham1 family non-canonical purine ntp pyrophosphataseEHW12_RS19175Not AvailableNegative4118287 - 411889520675.4
ribonuclease phEHW12_RS19180Not AvailableNegative4118899 - 411968427734.0
cyclic nucleotide-degrading phosphodiesteraseEHW12_RS19185Not AvailableNegative4119737 - 412049526700.7
rhomboid family intramembrane serine proteaseEHW12_RS19190Not AvailableNegative4120593 - 412125223095.2
p1 family peptidaseEHW12_RS19195Not AvailableNegative4121345 - 412241235172.5
duf2017 domain-containing proteinEHW12_RS19200Not AvailableNegative4122409 - 412299921242.8
atp-dependent clp protease adapter clpsEHW12_RS19205Not AvailableNegative4123056 - 412336711416.5
nicotinate phosphoribosyltransferaseEHW12_RS19210Not AvailablePositive4123489 - 412482947118.8
nicotinamidaseEHW12_RS19215Not AvailablePositive4124826 - 412547322186.4
atp-dependent dna helicaseEHW12_RS19220Not AvailablePositive4125483 - 412753172516.9

Displaying genes 4481 – 4490 of 7001 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.