Rhodococcus sp. NJ-530

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus sp. NJ-530 is a notable bacterium characterized by the presence of flagella, which enables motility. This trait is significant for its ecological interactions, as motility can enhance its ability to explore diverse environments and access nutrients. The organism possesses a complex genomic architecture with five replicons, indicating a potentially versatile genetic repertoire that may contribute to its adaptability and metabolic capabilities. The genomic data for Rhodococcus sp. NJ-530 can be accessed through multiple accession numbers: NZ_CP034156.1, NZ_CP034154.1, NZ_CP034152.1, NZ_CP034153.1, and NZ_CP034155.1. These accession numbers correspond to various segments of its genome, which may encompass genes involved in biodegradation, bioremediation, or other significant metabolic pathways. Given the characteristics of Rhodococcus species, NJ-530 could play a critical role in environmental microbiology, particularly in the degradation of pollutants or in bioremediation efforts. The presence of flagella may facilitate its movement toward contaminated sites, enhancing its effectiveness in bioremediation processes. Thus, Rhodococcus sp. NJ-530 represents a valuable organism for further study in microbial ecology and applications in environmental management.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus sp. NJ-530
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence.

Gene Summary

Adenine Count

107598 bp

Thymine Count

108683 bp

Guanine Count

174336 bp

Cytosine Count

174750 bp

Genome Length

565367 bp

Protein-coding Genes

599 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iclr family transcriptional regulatorEHW12_RS11685Not AvailableNegative2503637 - 250433824603.8
3-isopropylmalate dehydratase large subunitEHW12_RS11690Not AvailablePositive2504497 - 250591850572.1
3-isopropylmalate dehydratase small subunitEHW12_RS11695Not AvailablePositive2505947 - 250655522339.5
hu family dna-binding proteinEHW12_RS11700Not AvailablePositive2506713 - 250739923223.8
bifunctional nudix hydrolase/histidine phosphatase family proteinEHW12_RS11705Not AvailableNegative2507567 - 250849333884.5
rna degradosome polyphosphate kinaseEHW12_RS11710Not AvailableNegative2508511 - 251075482888.7
2-phospho-l-lactate guanylyltransferaseEHW12_RS11715Not AvailableNegative2510806 - 251155525486.9
nad(p)h-dependent glycerol-3-phosphate dehydrogenaseEHW12_RS11720Not AvailablePositive2511682 - 251268034050.8
cystathionine gamma-lyaseEHW12_RS11725Not AvailablePositive2512677 - 251382840315.7
d-alanine--d-alanine ligase family proteinEHW12_RS11730Not AvailablePositive2513900 - 251500638681.8

Displaying genes 3061 – 3070 of 7001 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.