Rhodococcus xishaensis

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus xishaensis is a species of bacteria characterized by the presence of flagella, which are important for motility. This organism has a single replicon, indicating a streamlined genetic structure. The genomic data for Rhodococcus xishaensis is cataloged under the accession number RKLO00000000.1, providing a reference point for further research and characterization. As a member of the genus Rhodococcus, this species is likely to be involved in various ecological processes, including the degradation of complex organic compounds. Rhodococcus species are known for their metabolic versatility, which allows them to thrive in diverse environments, including soil and contaminated sites. The presence of flagella suggests that Rhodococcus xishaensis may have enhanced mobility, potentially enabling it to colonize new niches or facilitate its movement toward nutrient sources. Overall, Rhodococcus xishaensis exemplifies the adaptability and ecological significance of the Rhodococcus genus, particularly in bioremediation contexts. Its characteristics may contribute to its role in environmental microbiology, where its motility and metabolic capabilities can influence the breakdown of pollutants and organic matter. Further studies on this species could enhance our understanding of its ecological functions and applications in biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus xishaensis
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus xishaensis strain LHW51113 scaffold22, whole genome

Gene Summary

Adenine Count

617212 bp

Thymine Count

625292 bp

Guanine Count

1241992 bp

Cytosine Count

1224571 bp

Genome Length

3711176 bp

Protein-coding Genes

3252 genes

Non-Coding Genes

91 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycoside hydrolase family 65 proteinEGT50_06155Not AvailablePositive1321187 - 132356287664.5
ribulose-phosphate 3-epimeraseEGT50_06160Not AvailablePositive1323573 - 132425623701.3
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdEGT50_06165Not AvailablePositive1324300 - 132528633743.1
riboflavin synthaseEGT50_06170Not AvailablePositive1325393 - 132601321582.6
bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase iiEGT50_06175Not AvailablePositive1326112 - 132735945225.9
6,7-dimethyl-8-ribityllumazine synthaseEGT50_06180Not AvailablePositive1327356 - 132785317032.3
ph domain-containing proteinEGT50_06185Not AvailablePositive1327850 - 132831117056.7
excinuclease abc subunit uvrcEGT50_06190Not AvailablePositive1328362 - 133049177602.8
rnase adapter rapzEGT50_06195Not AvailablePositive1330521 - 133138731914.4
uridine diphosphate-n-acetylglucosamine-binding protein yvckEGT50_06200Not AvailablePositive1331384 - 133247838144.5

Displaying genes 1251 – 1260 of 3343 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.