Rathayibacter sp. PhB179

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter sp. PhB179 is a Gram-positive bacterium characterized by its rod shape. It possesses a single replicon, indicating a streamlined genomic structure that may influence its replication and stability. The accession number for this strain is SLVD00000000.1, which provides a reference point for further genomic studies and analyses. The Gram-positive nature of Rathayibacter sp. PhB179 suggests that it has a thick peptidoglycan layer in its cell wall, which can confer advantages such as resilience against certain environmental stresses and the potential for pathogenicity in specific contexts. The rod shape is common among many bacterial species and can play a role in nutrient uptake and motility, which may affect its ecological interactions. Understanding the traits of Rathayibacter sp. PhB179 contributes to the broader knowledge of microbial diversity and the ecological roles that such bacteria may play in their environments. As a member of the Rathayibacter genus, this strain may be involved in interactions with plant hosts or other microorganisms, impacting soil health and plant growth. Further research could elucidate its specific ecological functions and potential applications in agriculture or biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter sp. PhB179
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter sp. PhB179 Ga0304849_121, whole genome shotgun

Gene Summary

Adenine Count

661762 bp

Thymine Count

661320 bp

Guanine Count

1702274 bp

Cytosine Count

1689497 bp

Genome Length

4714856 bp

Protein-coding Genes

4281 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative fmn-dependent luciferase-like monooxygenaseEDF43_10159Not AvailablePositive55712 - 5680640302.6
fmn reductaseEDF43_10160Not AvailablePositive56818 - 5743521578.4
carbohydrate abc transporter substrate-binding protein (cut1 family)EDF43_10161Not AvailablePositive57544 - 5888447643.2
multiple sugar transport system permease proteinEDF43_10162Not AvailablePositive58898 - 5983033550.3
carbohydrate abc transporter membrane protein 2 (cut1 family)EDF43_10163Not AvailablePositive59827 - 6065130416.2
serine/threonine protein kinaseEDF43_10164Not AvailablePositive60809 - 6179834821.8
double zinc ribbon proteinEDF43_10165Not AvailableNegative62118 - 6302631033.8
secreted protein with ig-like and vwfa domainEDF43_10166Not AvailableNegative63023 - 6429744426.5
glycosyl hydrolase family 114EDF43_10167Not AvailablePositive64310 - 6509828008.1
aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit aEDF43_10168Not AvailableNegative65156 - 6656548770.5

Displaying genes 61 – 70 of 4331 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.