Rathayibacter sp. PhB179

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Rathayibacter

Description

Rathayibacter sp. PhB179 is a Gram-positive bacterium characterized by its rod shape. It possesses a single replicon, indicating a streamlined genomic structure that may influence its replication and stability. The accession number for this strain is SLVD00000000.1, which provides a reference point for further genomic studies and analyses. The Gram-positive nature of Rathayibacter sp. PhB179 suggests that it has a thick peptidoglycan layer in its cell wall, which can confer advantages such as resilience against certain environmental stresses and the potential for pathogenicity in specific contexts. The rod shape is common among many bacterial species and can play a role in nutrient uptake and motility, which may affect its ecological interactions. Understanding the traits of Rathayibacter sp. PhB179 contributes to the broader knowledge of microbial diversity and the ecological roles that such bacteria may play in their environments. As a member of the Rathayibacter genus, this strain may be involved in interactions with plant hosts or other microorganisms, impacting soil health and plant growth. Further research could elucidate its specific ecological functions and potential applications in agriculture or biotechnology.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusRathayibacter
SpeciesRathayibacter sp. PhB179
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rathayibacter sp. PhB179 Ga0304849_121, whole genome shotgun

Gene Summary

Adenine Count

661762 bp

Thymine Count

661320 bp

Guanine Count

1702274 bp

Cytosine Count

1689497 bp

Genome Length

4714856 bp

Protein-coding Genes

4281 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEDF43_10120Not AvailablePositive15775 - 1637420550.9
hypothetical proteinEDF43_10121Not AvailablePositive16374 - 1699721432.9
csbd-like proteinEDF43_10122Not AvailablePositive17081 - 172546141.19
ipt/tig domain-containing proteinEDF43_10123Not AvailableNegative17365 - 1893052611.5
hypothetical proteinEDF43_10124Not AvailableNegative19164 - 1945411043.2
d-ala-d-ala carboxypeptidaseEDF43_10125Not AvailableNegative20119 - 2100630384.2
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseEDF43_10126Not AvailablePositive21222 - 2276654361.4
emrb/qaca subfamily drug resistance transporterEDF43_10127Not AvailablePositive23045 - 2487764391.5
Ncrna_class:rnase_p_rnaNot AvailableNot AvailablePositive23290 - 23668Not Available
beta-glucosidaseEDF43_10128Not AvailablePositive25037 - 2653654751.7

Displaying genes 21 – 30 of 4331 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.