Odoribacter sp. AF21-41

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Odoribacteraceae

Genus

Odoribacter

Description

Odoribacter sp. AF21-41 is a Gram-negative bacterium characterized by having a single replicon. The genomic information for this strain is available under the accession number QTWN00000000.1. The Gram-negative classification indicates that Odoribacter sp. AF21-41 possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical of this group of bacteria. This structural feature often contributes to the organism's resilience in various environments and can influence its interactions with other microorganisms and host organisms. The presence of only one replicon suggests a streamlined genomic organization, which may be advantageous for efficiency in replication and gene expression. Such a trait can indicate a specialization in certain ecological niches or metabolic pathways, although specific metabolic capabilities or ecological roles of Odoribacter sp. AF21-41 are not detailed in the provided information. In summary, Odoribacter sp. AF21-41's classification as a Gram-negative bacterium with a single replicon can provide insights into its potential adaptability and ecological interactions. Understanding these traits could facilitate further studies on its role within microbial communities and its contributions to broader ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyOdoribacteraceae
GenusOdoribacter
SpeciesOdoribacter sp. AF21-41
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Odoribacter sp. AF21-41 AF21-41.Scaf49, whole genome shotgun

Gene Summary

Adenine Count

1553139 bp

Thymine Count

1558919 bp

Guanine Count

1171922 bp

Cytosine Count

1165135 bp

Genome Length

5449445 bp

Protein-coding Genes

4295 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDWX82_16170Not AvailablePositive4034363 - 403537938583.1
hypothetical proteinDWX82_16175Not AvailablePositive4035416 - 403679851537.4
hypothetical proteinDWX82_16180Not AvailablePositive4036816 - 403913785014.6
hypothetical proteinDWX82_16185Not AvailablePositive4039159 - 404079661223.1
aspartate ammonia-lyaseDWX82_16190Not AvailablePositive4041081 - 404249351986.2
duf3332 domain-containing proteinDWX82_16195Not AvailablePositive4042564 - 404304617785.6
atp-dependent dna helicase recgDWX82_16200Not AvailableNegative4043498 - 404560079753.0
hypothetical proteinDWX82_16205Not AvailablePositive4045724 - 404634424607.0
cob(i)yrinic acid a,c-diamide adenosyltransferaseDWX82_16210Not AvailablePositive4046442 - 404699320571.9
duf2461 domain-containing proteinDWX82_16215Not AvailablePositive4047047 - 404770625558.4

Displaying genes 3211 – 3220 of 4380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.