Odoribacter sp. AF21-41

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Odoribacteraceae

Genus

Odoribacter

Description

Odoribacter sp. AF21-41 is a Gram-negative bacterium characterized by having a single replicon. The genomic information for this strain is available under the accession number QTWN00000000.1. The Gram-negative classification indicates that Odoribacter sp. AF21-41 possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical of this group of bacteria. This structural feature often contributes to the organism's resilience in various environments and can influence its interactions with other microorganisms and host organisms. The presence of only one replicon suggests a streamlined genomic organization, which may be advantageous for efficiency in replication and gene expression. Such a trait can indicate a specialization in certain ecological niches or metabolic pathways, although specific metabolic capabilities or ecological roles of Odoribacter sp. AF21-41 are not detailed in the provided information. In summary, Odoribacter sp. AF21-41's classification as a Gram-negative bacterium with a single replicon can provide insights into its potential adaptability and ecological interactions. Understanding these traits could facilitate further studies on its role within microbial communities and its contributions to broader ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyOdoribacteraceae
GenusOdoribacter
SpeciesOdoribacter sp. AF21-41
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Odoribacter sp. AF21-41 AF21-41.Scaf49, whole genome shotgun

Gene Summary

Adenine Count

1553139 bp

Thymine Count

1558919 bp

Guanine Count

1171922 bp

Cytosine Count

1165135 bp

Genome Length

5449445 bp

Protein-coding Genes

4295 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (guanosine(37)-n1)-methyltransferase trmdDWX82_13405Not AvailableNegative3356870 - 335754725433.4
gnat family n-acetyltransferaseDWX82_13410Not AvailablePositive3357646 - 335817620155.4
s9 family peptidaseDWX82_13415Not AvailableNegative3358304 - 336042781011.8
amidohydrolaseDWX82_13420Not AvailableNegative3360450 - 336121729323.2
glycerol acyltransferaseDWX82_13425Not AvailableNegative3361253 - 336180120990.9
50s ribosomal protein l21DWX82_13430Not AvailablePositive3361996 - 336230711626.3
50s ribosomal protein l27DWX82_13435Not AvailablePositive3362340 - 33626009321.27
serine--trna ligaseDWX82_13440Not AvailablePositive3362740 - 336401447884.3
duf4286 family proteinDWX82_13445Not AvailablePositive3364103 - 336440811845.3
crossover junction endodeoxyribonuclease ruvcDWX82_13450Not AvailablePositive3364458 - 336501220393.1

Displaying genes 2661 – 2670 of 4380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.