Odoribacter sp. AF21-41

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Odoribacteraceae

Genus

Odoribacter

Description

Odoribacter sp. AF21-41 is a Gram-negative bacterium characterized by having a single replicon. The genomic information for this strain is available under the accession number QTWN00000000.1. The Gram-negative classification indicates that Odoribacter sp. AF21-41 possesses a thin peptidoglycan layer surrounded by an outer membrane, which is typical of this group of bacteria. This structural feature often contributes to the organism's resilience in various environments and can influence its interactions with other microorganisms and host organisms. The presence of only one replicon suggests a streamlined genomic organization, which may be advantageous for efficiency in replication and gene expression. Such a trait can indicate a specialization in certain ecological niches or metabolic pathways, although specific metabolic capabilities or ecological roles of Odoribacter sp. AF21-41 are not detailed in the provided information. In summary, Odoribacter sp. AF21-41's classification as a Gram-negative bacterium with a single replicon can provide insights into its potential adaptability and ecological interactions. Understanding these traits could facilitate further studies on its role within microbial communities and its contributions to broader ecological processes.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyOdoribacteraceae
GenusOdoribacter
SpeciesOdoribacter sp. AF21-41
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Odoribacter sp. AF21-41 AF21-41.Scaf49, whole genome shotgun

Gene Summary

Adenine Count

1553139 bp

Thymine Count

1558919 bp

Guanine Count

1171922 bp

Cytosine Count

1165135 bp

Genome Length

5449445 bp

Protein-coding Genes

4295 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinDWX82_10535Not AvailablePositive2645969 - 264640316273.5
dihydroorotate dehydrogenaseDWX82_10540Not AvailableNegative2646471 - 264737631984.1
dihydroorotate dehydrogenase electron transfer subunitDWX82_10545Not AvailableNegative2647364 - 264812528064.2
excinuclease abc subunit aDWX82_10550Not AvailableNegative2648155 - 2650917102965.0
50s ribosomal protein l9DWX82_10555Not AvailableNegative2651042 - 265148216164.7
30s ribosomal protein s18DWX82_10560Not AvailableNegative2651504 - 265177310546.2
30s ribosomal protein s6DWX82_10565Not AvailableNegative2651777 - 265212713746.5
endolytic transglycosylase mltgDWX82_10570Not AvailableNegative2652345 - 265337939856.2
nucleoid-associated proteinDWX82_10575Not AvailableNegative2653392 - 265443841108.0
duf3078 domain-containing proteinDWX82_10580Not AvailableNegative2654444 - 265604563148.7

Displaying genes 2101 – 2110 of 4380 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.