Runella sp. SP2

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella sp. SP2 is a Gram-negative bacterium characterized by its bacilli shape. This organism possesses a total of four replicons, which is significant for its genetic architecture and potential adaptability. The genetic information for Runella sp. SP2 is documented in several accessions: NZ_CP031033.1, NZ_CP031031.1, NZ_CP031030.1, and NZ_CP031032.1. The presence of multiple replicons may suggest a complex regulatory system that could enhance the bacterium's ability to respond to environmental changes. This trait is often associated with increased stability and adaptability in various ecological niches. Gram-negative bacteria, such as Runella sp. SP2, are known for their distinctive cell wall structure, which can impact their interactions with other microorganisms and their resistance to certain antibiotics. Understanding the specific traits of Runella sp. SP2, including its Gram-negative classification and bacilli morphology, can provide insights into its ecological role. The genetic diversity indicated by the multiple replicons may allow Runella sp. SP2 to inhabit diverse environments and utilize various resources, potentially contributing to biogeochemical cycles. Further studies could elucidate the ecological implications of its genetic makeup and its interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella sp. SP2
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella sp. SP2 chromosome, complete genome.

Gene Summary

Adenine Count

2053774 bp

Thymine Count

2066116 bp

Guanine Count

1648785 bp

Cytosine Count

1663855 bp

Genome Length

7432530 bp

Protein-coding Genes

5913 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ix secretion system outer membrane channel protein porvDTQ70_RS15545Not AvailablePositive3896607 - 389781843494.5
alginate lyase family proteinDTQ70_RS15550Not AvailableNegative3897967 - 389985073977.8
duf5606 domain-containing proteinDTQ70_RS15555Not AvailableNegative3899915 - 390036416428.7
hypothetical proteinDTQ70_RS15560Not AvailableNegative3900523 - 390140131056.7
molybdopterin-synthase adenylyltransferase moebDTQ70_RS15565Not AvailablePositive3901532 - 390261139795.2
upf0175 family proteinDTQ70_RS15570Not AvailablePositive3902661 - 39028979019.16
duf3368 domain-containing proteinDTQ70_RS15575Not AvailablePositive3902897 - 390337317617.8
trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmdDTQ70_RS15580Not AvailablePositive3903378 - 390404925327.3
fad/nad(p)-binding oxidoreductaseDTQ70_RS15585Not AvailableNegative3904129 - 390533744861.3
duf983 domain-containing proteinDTQ70_RS15590Not AvailableNegative3905587 - 390597615129.8

Displaying genes 3091 – 3100 of 6085 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.