Runella sp. SP2

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella sp. SP2 is a Gram-negative bacterium characterized by its bacilli shape. This organism possesses a total of four replicons, which is significant for its genetic architecture and potential adaptability. The genetic information for Runella sp. SP2 is documented in several accessions: NZ_CP031033.1, NZ_CP031031.1, NZ_CP031030.1, and NZ_CP031032.1. The presence of multiple replicons may suggest a complex regulatory system that could enhance the bacterium's ability to respond to environmental changes. This trait is often associated with increased stability and adaptability in various ecological niches. Gram-negative bacteria, such as Runella sp. SP2, are known for their distinctive cell wall structure, which can impact their interactions with other microorganisms and their resistance to certain antibiotics. Understanding the specific traits of Runella sp. SP2, including its Gram-negative classification and bacilli morphology, can provide insights into its ecological role. The genetic diversity indicated by the multiple replicons may allow Runella sp. SP2 to inhabit diverse environments and utilize various resources, potentially contributing to biogeochemical cycles. Further studies could elucidate the ecological implications of its genetic makeup and its interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella sp. SP2
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella sp. SP2 plasmid pSP2_2, complete sequence.

Gene Summary

Adenine Count

23912 bp

Thymine Count

21836 bp

Guanine Count

15548 bp

Cytosine Count

15670 bp

Genome Length

76966 bp

Protein-coding Genes

43 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Tail tape measure proteinDTQ70_RS04355Not AvailablePositive1033796 - 1036972115667.0
Hypothetical proteinDTQ70_RS04365Not AvailableNegative1037232 - 103787924083.9
hypothetical proteinDTQ70_RS04370Not AvailableNegative1037934 - 10381166900.29
2_nc_021803: site specific recombinase, tyrosineDTQ70_RS04375Not AvailableNegative1038154 - 103914638769.2
Putative exonucleaseDTQ70_RS04380Not AvailableNegative1039104 - 103963119560.3
hypothetical proteinDTQ70_RS04385Not AvailableNegative1039701 - 104044427625.8
phage integrase sam-like domain-containing proteinDTQ70_RS04390Not AvailableNegative1040609 - 104184148154.1
Transposase irso15-likeDTQ70_RS04395Not AvailableNegative1042041 - 104296135593.5
sdr family oxidoreductaseDTQ70_RS00010Not AvailablePositive1020 - 180828518.3
l-fucose:h+ symporter permeaseDTQ70_RS00015Not AvailablePositive1898 - 311844388.1

Displaying genes 1 – 10 of 6085 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.