Runella sp. SP2

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Spirosomataceae

Genus

Runella

Description

Runella sp. SP2 is a Gram-negative bacterium characterized by its bacilli shape. This organism possesses a total of four replicons, which is significant for its genetic architecture and potential adaptability. The genetic information for Runella sp. SP2 is documented in several accessions: NZ_CP031033.1, NZ_CP031031.1, NZ_CP031030.1, and NZ_CP031032.1. The presence of multiple replicons may suggest a complex regulatory system that could enhance the bacterium's ability to respond to environmental changes. This trait is often associated with increased stability and adaptability in various ecological niches. Gram-negative bacteria, such as Runella sp. SP2, are known for their distinctive cell wall structure, which can impact their interactions with other microorganisms and their resistance to certain antibiotics. Understanding the specific traits of Runella sp. SP2, including its Gram-negative classification and bacilli morphology, can provide insights into its ecological role. The genetic diversity indicated by the multiple replicons may allow Runella sp. SP2 to inhabit diverse environments and utilize various resources, potentially contributing to biogeochemical cycles. Further studies could elucidate the ecological implications of its genetic makeup and its interactions within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilySpirosomataceae
GenusRunella
SpeciesRunella sp. SP2
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Runella sp. SP2 chromosome, complete genome.

Gene Summary

Adenine Count

2053774 bp

Thymine Count

2066116 bp

Guanine Count

1648785 bp

Cytosine Count

1663855 bp

Genome Length

7432530 bp

Protein-coding Genes

5913 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system vapb family antitoxinDTQ70_RS12900Not AvailablePositive3077383 - 30775898045.92
pin domain-containing proteinDTQ70_RS12905Not AvailablePositive3077570 - 307797715419.6
comea family dna-binding proteinDTQ70_RS12910Not AvailablePositive3078113 - 307907835839.2
wd40/yvtn/bnr-like repeat-containing proteinDTQ70_RS12915Not AvailableNegative3079086 - 308011436465.1
s41 family peptidaseDTQ70_RS12920Not AvailablePositive3080196 - 308159651547.1
abc transporter atp-binding proteinDTQ70_RS12925Not AvailableNegative3081774 - 308249626523.0
serine hydrolaseDTQ70_RS12930Not AvailableNegative3082493 - 308358441228.9
hypothetical proteinDTQ70_RS12935Not AvailableNegative3083653 - 308618194872.7
hypothetical proteinDTQ70_RS12940Not AvailablePositive3086508 - 308725128534.3
tlpa family protein disulfide reductaseDTQ70_RS12945Not AvailablePositive3087294 - 308792924904.5

Displaying genes 2561 – 2570 of 6085 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.