Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DRW42_04890 | Not Available | Positive | 1135938 - 1139039 | 113199.0 |
| hypothetical protein | DRW42_04895 | Not Available | Positive | 1139062 - 1140759 | 62871.7 |
| glycoside hydrolase | DRW42_04900 | Not Available | Negative | 1140862 - 1141983 | 41882.4 |
| hypothetical protein | DRW42_04905 | Not Available | Negative | 1141997 - 1142860 | 33293.4 |
| sam-dependent methyltransferase | DRW42_04910 | Not Available | Positive | 1142905 - 1143687 | 29905.0 |
| duf1345 domain-containing protein | DRW42_04915 | Not Available | Positive | 1143692 - 1144363 | 25129.0 |
| blai/meci/copy family transcriptional regulator | DRW42_04920 | Not Available | Positive | 1144988 - 1145356 | 14239.0 |
| hypothetical protein | DRW42_04925 | Not Available | Positive | 1145353 - 1146912 | 58403.8 |
| hypothetical protein | DRW42_04930 | Not Available | Positive | 1146925 - 1149099 | 81748.9 |
| hypothetical protein | DRW42_04935 | Not Available | Positive | 1149100 - 1151475 | 90050.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

