Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter miscanthi |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2015890 bp
Thymine Count
2019062 bp
Guanine Count
1320136 bp
Cytosine Count
1341798 bp
Genome Length
6696979 bp
Protein-coding Genes
5574 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin-like domain-containing protein | DRW42_04635 | Not Available | Negative | 1078034 - 1078915 | 34505.4 |
| fasciclin domain-containing protein | DRW42_04640 | Not Available | Negative | 1079148 - 1079699 | 19247.7 |
| short chain dehydrogenase | DRW42_04645 | Not Available | Negative | 1080018 - 1080800 | 28469.4 |
| coproporphyrinogen iii oxidase | DRW42_04650 | Not Available | Negative | 1080984 - 1082108 | 42680.6 |
| mobile mystery protein a | DRW42_04655 | Not Available | Positive | 1082279 - 1082737 | 17100.1 |
| duf4271 domain-containing protein | DRW42_04665 | Not Available | Positive | 1083416 - 1084393 | 37485.9 |
| uroporphyrinogen-iii synthase | DRW42_04670 | Not Available | Positive | 1084408 - 1085178 | 29319.3 |
| gliding motility-associated lipoprotein | DRW42_04675 | Not Available | Positive | 1085404 - 1086729 | 49364.1 |
| gliding motility protein gldl | DRW42_04680 | Not Available | Positive | 1086772 - 1087575 | 28611.2 |
| gliding motility protein gldm | DRW42_04685 | Not Available | Positive | 1087617 - 1089149 | 54691.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

